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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2503255_2507482_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2503255 - 2507482

Intron Length:
4228

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGCCTT

5'SS Class:
strong_major

3'SS Sequence:
TGCTTTATTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTAACAA

U12 Branch Point Sequence:
TTTTGCTTTATT

Flanking Amino Acid:
AKKTEDRLGSRNEDDDPRKH

Intron Amino Acid Position:
409

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.3
0.76
1
74.4
41.9

Major BPS
61.8
0.29
1.1
69.7
35.6

Major PPT
82.6
0.73
0.9
77.4
35.6

Minor 5ss
49.9
-0
2.8
73.5
43.2

Minor BPS
65.1
0.56
2.1
87.87
37.8

Associated Gene:

Gene:
GRK7

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2502912 - 2523696
20785