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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2507755_2521976_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2507755 - 2521976

Intron Length:
14222

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGAGTAGA

5'SS Class:
strong_major

3'SS Sequence:
TTGTTTGCTATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTGAT

U12 Branch Point Sequence:
TGTATAGTAAAT

Flanking Amino Acid:
VKEGKTITQRAGTNGYMAPE

Intron Amino Acid Position:
319

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.4
0.76
0.9
74.1
38.4

Major BPS
88.6
0.96
0.8
77.7
37.1

Major PPT
77.8
0.63
0.9
73.2
37.4

Minor 5ss
29.2
-2.4
2.5
25
36.7

Minor BPS
44.7
-0.3
2.3
67.84
42.3

Associated Gene:

Gene:
GRK7

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2502912 - 2523696
20785