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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25167682_25168163_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25167682 - 25168163

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTAAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTTCTTTTAAAA

Flanking Amino Acid:

IVIATNIAETSITIDDVVFV

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.6

35.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.54

70.9

37.6

Minor 5ss

35.4

-1.7

2.8

45.8

42.3

Minor BPS

62.4

0.39

1.4

69.31

Associated Gene:

Gene:

DHX36

Ensembl Gene ID:

ENSAPLG00000012597

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013164

25157470 - 25176530

19061