Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_25179781_25180081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25179781 - 25180081

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTCACGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TGTCTGTTCACG

Flanking Amino Acid:

VVLVYQKVNDGWYEGERLRD

Intron Amino Acid Position:

797

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.8

79.6

35.4

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

73.3

0.52

0.9

65.9

35.8

Minor 5ss

-1.8

2.8

39.3

40.3

Minor BPS

-0.5

2.4

56.89

44.6

Associated Gene:

Gene:

ARHGEF26

Ensembl Gene ID:

ENSAPLG00000012467

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012994

25178638 - 25225954

47317