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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2522415_2523180_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2522415 - 2523180

Intron Length:
766

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGAGCT

5'SS Class:
strong_major

3'SS Sequence:
CTTGCTTTTCTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTGCAT

U12 Branch Point Sequence:
GCTTCCTTACCT

Flanking Amino Acid:
RVLGKGGFGEVCAIQVKNTG

Intron Amino Acid Position:
173

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.6
0.98
0.8
81.6
30

Major BPS
75
0.62
1.4
85.7
34.9

Major PPT
80.6
0.69
0.8
73.1
37.3

Minor 5ss
33.1
-1.9
3.4
48.3
47.4

Minor BPS
73.1
0.8
1.6
84.57
42.1

Associated Gene:

Gene:
GRK7

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2502912 - 2523696
20785