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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25434347_25437647_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
25434347 - 25437647

Intron Length:
3301

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTTGCTAA

5'SS Class:
major

3'SS Sequence:
TTTTTACCTATAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATTCAT

U12 Branch Point Sequence:
AATTTTTTACCT

Flanking Amino Acid:
PFAATATANQIPIISAEHLT

Intron Amino Acid Position:
295

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.9
0.47
1.2
65
37.2

Major BPS
92.2
1.05
0.7
91.9
19.6

Major PPT
83.4
0.75
0.7
78.4
29.4

Minor 5ss
45.6
-0.5
2.5
56
48.2

Minor BPS
64.6
0.54
1.6
78.76
37.6

Associated Gene:

Gene:
MBNL1

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25431384 - 25445991
14608

25431384 - 25445991
14608