Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_25444623_25445448_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25444623 - 25445448

Intron Length:

826

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTAATTAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGCCTGCTAATT

Flanking Amino Acid:

AQAAATAAAMTQSAVKSLKR

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

58.3

0.19

1.1

38.3

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

43.8

-0.3

2.2

62.16

42.2

Associated Gene:

Gene:

MBNL1

Ensembl Gene ID:

ENSAPLG00000012049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012600

25431384 - 25445991

14608

ENSAPLT00000030432

25434272 - 25445991

11720