Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_25536024_25537255_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25536024 - 25537255

Intron Length:

1232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTGATTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTGTTTTGATT

Flanking Amino Acid:

AYHPLVTPLQAVNNTGRCEI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.9

30.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

85.5

0.8

77.1

41.6

Minor 5ss

33.9

-1.8

2.8

41.5

45.1

Minor BPS

66.4

0.6

1.3

81.5

34.7

Associated Gene:

Gene:

SUCNR1

Ensembl Gene ID:

ENSAPLG00000011989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048226

25535076 - 25537939

2864