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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25556330_25556864_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25556330 - 25556864

Intron Length:

535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

GTTAAAGTTAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

GAGTGTTAAAGT

Flanking Amino Acid:

TSLFRTVGHAQEDFFCLYVC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.1

32.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

48.1

-0.1

1.8

50.3

46.9

Minor 5ss

35.5

-1.6

2.8

42.4

44.3

Minor BPS

42.8

-0.4

2.2

56.95

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029439

25556294 - 25560864

4571