Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_25602396_25603040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25602396 - 25603040

Intron Length:

645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

CCCACTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

TTTCCCCCCACT

Flanking Amino Acid:

PTIQWTKISSGPPAAESPDG

Intron Amino Acid Position:

1604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.3

32.2

Major BPS

0.27

1.3

53.3

44.2

Major PPT

74.8

0.56

0.8

68.3

31.8

Minor 5ss

48.4

-0.1

2.8

67.4

Minor BPS

48.8

-0

2.3

78.94

42.7

Associated Gene:

Gene:

IGSF10

Ensembl Gene ID:

ENSAPLG00000011740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012222

25593119 - 25606036

12918