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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25629879_25631841_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25629879 - 25631841

Intron Length:

1963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

GCTTTGCTATCT

Flanking Amino Acid:

HEALQLRLNLVGGMFDTVQR

Intron Amino Acid Position:

1366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

76.6

33.6

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

86.3

0.82

0.8

80.8

36.4

Minor 5ss

31.7

-2.1

3.1

36.4

Minor BPS

42.9

-0.4

2.4

64.57

45.8

Associated Gene:

Gene:

MED12L

Ensembl Gene ID:

ENSAPLG00000010557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036429

25609286 - 25731029

121744

ENSAPLT00000022605

25609286 - 25731029

121744

ENSAPLT00000011035

25609286 - 25731029

121744