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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25640882_25642829_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25640882 - 25642829

Intron Length:

1948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

TTTTCCAAAAGA

Flanking Amino Acid:

PQVCLFPQETGKLFPGIRSS

Intron Amino Acid Position:

988

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

73.2

39.3

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

0.67

0.7

76.1

26.1

Minor 5ss

44.2

-0.6

2.9

59.3

45.5

Minor BPS

0.12

2.2

76.13

41.2

Associated Gene:

Gene:

MED12L

Ensembl Gene ID:

ENSAPLG00000010557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011035

25609286 - 25731029

121744

ENSAPLT00000036429

25609286 - 25731029

121744

ENSAPLT00000022605

25609286 - 25731029

121744