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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25642932_25643669_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25642932 - 25643669

Intron Length:

738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

CCATATTCCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

TGTCCCATATTC

Flanking Amino Acid:

HVALPSLLAAACGDPDAEPG

Intron Amino Acid Position:

954

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

77.2

37.6

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

66.7

0.38

0.9

60.9

34.7

Minor 5ss

37.2

-1.4

46.5

42.8

Minor BPS

50.2

-0

1.9

65.93

39.4

Associated Gene:

Gene:

MED12L

Ensembl Gene ID:

ENSAPLG00000010557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036429

25609286 - 25731029

121744

ENSAPLT00000022605

25609286 - 25731029

121744

ENSAPLT00000011035

25609286 - 25731029

121744