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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25644781_25646803_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25644781 - 25646803

Intron Length:

2023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTCGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

GCTTCTGTATTT

Flanking Amino Acid:

NVCMGHQDAGRINDIANLCA

Intron Amino Acid Position:

866

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

74.9

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

80.7

0.69

0.7

24.9

Minor 5ss

30.1

-2.3

3.2

37.9

46.9

Minor BPS

47.6

-0.1

2.2

67.71

44.1

Associated Gene:

Gene:

MED12L

Ensembl Gene ID:

ENSAPLG00000010557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036429

25609286 - 25731029

121744

ENSAPLT00000022605

25609286 - 25731029

121744

ENSAPLT00000011035

25609286 - 25731029

121744