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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25651617_25704669_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25651617 - 25704669

Intron Length:

53053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTGGTCTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATAATTAAAAAA

Flanking Amino Acid:

QYATHFPIPLDESSSHECNQ

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.8

79.3

28.9

Major BPS

73.8

0.59

0.9

26.8

Major PPT

79.9

0.67

0.9

76.7

37.4

Minor 5ss

-2.2

3.2

36.8

41.9

Minor BPS

40.8

-0.7

1.8

49.16

34.8

Associated Gene:

Gene:

MED12L

Ensembl Gene ID:

ENSAPLG00000010557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036429

25609286 - 25731029

121744

ENSAPLT00000022605

25609286 - 25731029

121744

ENSAPLT00000011035

25609286 - 25731029

121744