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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25725957_25729278_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25725957 - 25729278

Intron Length:

3322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

ACTTATGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TAATTGTGAACT

Flanking Amino Acid:

KKRQATDPNIEWTQIITRYL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

73.2

0.52

39.9

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

52.3

0.15

2.1

74.78

41.5

Associated Gene:

Gene:

MED12L

Ensembl Gene ID:

ENSAPLG00000010557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022605

25609286 - 25731029

121744

ENSAPLT00000011035

25609286 - 25731029

121744

ENSAPLT00000036429

25609286 - 25731029

121744