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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25729439_25730837_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

25729439 - 25730837

Intron Length:

1399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAAAAA

5'SS Class:

major

3'SS Sequence:

TGTTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TGTGCTATAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

32.5

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

87.7

0.85

0.8

85.7

33.4

Minor 5ss

38.2

-1.3

2.9

48.3

47.4

Minor BPS

63.4

0.5

1.7

81.57

39.9

Associated Gene:

Gene:

MED12L

Ensembl Gene ID:

ENSAPLG00000010557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036429

25609286 - 25731029

121744

ENSAPLT00000022605

25609286 - 25731029

121744

ENSAPLT00000011035

25609286 - 25731029

121744