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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25742118_25747811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25742118 - 25747811

Intron Length:

5694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTATAACTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTT

Flanking Amino Acid:

GLGGRPFQFSFFPDLLKIIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

76.1

34.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.5

0.55

0.9

71.5

39.2

Minor 5ss

32.1

-2

2.7

37.9

Minor BPS

62.5

0.47

1.8

84.55

36.3

Associated Gene:

Gene:

CLRN1

Ensembl Gene ID:

ENSAPLG00000010552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010977

25741865 - 25748802

6938