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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25780312_25782543_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
25780312 - 25782543

Intron Length:
2232

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAC|GTAAGAAAC

5'SS Class:
major

3'SS Sequence:
CTATCACTTGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCAT

U12 Branch Point Sequence:
TGTTCAATAATT

Flanking Amino Acid:
WLYEHAYKKSPLPDKFSSLD

Intron Amino Acid Position:
38

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.7
0.61
1.3
75.1
35.1

Major BPS
94.9
1.12
0.6
93.9
14.7

Major PPT
77
0.61
0.9
70.2
35.1

Minor 5ss
35.1
-1.7
3
43.2
37.2

Minor BPS
62
0.45
1.9
83.41
37

Associated Gene:

Gene:
ERICH6

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25778526 - 25788836
10311

25779702 - 25788836
9135