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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25782816_25783639_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
25782816 - 25783639

Intron Length:
824

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGGGTCAG

5'SS Class:
major

3'SS Sequence:
ACCTCCACTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAT

U12 Branch Point Sequence:
TCATCCATACCT

Flanking Amino Acid:
ESSWDSMQIEVEEDCTPKCE

Intron Amino Acid Position:
93

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.4
0.69
1
64.9
42.8

Major BPS
76.2
0.65
1.1
65.3
43.7

Major PPT
67.2
0.39
0.8
63.5
32

Minor 5ss
26.7
-2.7
2.9
30.9
43.2

Minor BPS
58.4
0.34
1.9
77.78
44.2

Associated Gene:

Gene:
ERICH6

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25778526 - 25788836
10311

25779702 - 25788836
9135