Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_25787302_25788090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25787302 - 25788090

Intron Length:

789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTTTG

5'SS Class:

major

3'SS Sequence:

TCCTCTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

ACCACCTTGATG

Flanking Amino Acid:

STCYYPHGSVWINMNVQGGQ

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

71.6

40.8

Major BPS

71.5

0.53

1.1

43.2

Major PPT

82.1

0.72

0.7

80.7

24.6

Minor 5ss

42.9

-0.8

54.6

44.9

Minor BPS

55.6

0.03

1.4

53.02

42.3

Associated Gene:

Gene:

ERICH6

Ensembl Gene ID:

ENSAPLG00000010497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025966

25778526 - 25788836

10311

ENSAPLT00000010930

25779702 - 25788836

9135