Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_25801802_25802677_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25801802 - 25802677

Intron Length:

876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCAA

5'SS Class:

major

3'SS Sequence:

AATCTGCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATTTTTTAAAT

Flanking Amino Acid:

KHEAKKAAKQEAKADSNQES

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

58.8

41.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.9

0.54

65.5

40.2

Minor 5ss

29.1

-2.4

3.4

38.6

46.4

Minor BPS

74.5

0.85

1.2

85.98

33.4

Associated Gene:

Gene:

EIF2A

Ensembl Gene ID:

ENSAPLG00000010076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024940

25799790 - 25813607

13818

ENSAPLT00000010545

25799790 - 25813607

13818