Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_25809846_25810553_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25809846 - 25810553

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGCAAA

5'SS Class:

major

3'SS Sequence:

TCTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GCATCTGTGACT

Flanking Amino Acid:

EVHFFENNNFNTITNKLHLQ

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

68.2

38.6

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

95.2

1.02

0.5

91.6

19.5

Minor 5ss

40.9

-1

2.9

54.2

43.9

Minor BPS

50.1

0.08

68.05

43.2

Associated Gene:

Gene:

EIF2A

Ensembl Gene ID:

ENSAPLG00000010076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024940

25799790 - 25813607

13818

ENSAPLT00000010545

25799790 - 25813607

13818