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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25811148_25812180_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
25811148 - 25812180

Intron Length:
1033

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTGAGTATT

5'SS Class:
strong_major

3'SS Sequence:
GTATCTGTTGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTAAT

U12 Branch Point Sequence:
ACCACTTTAATA

Flanking Amino Acid:
NVLATWQAYTTAKDGTAGVP

Intron Amino Acid Position:
98

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.5
0.84
0.8
89.7
22.3

Major BPS
87.2
0.92
0.9
87.6
25.6

Major PPT
75.7
0.58
1
69.3
41.5

Minor 5ss
37.9
-1.4
3
51.7
39.1

Minor BPS
61.7
0.36
1.3
61.74
39.2

Associated Gene:

Gene:
EIF2A

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25799790 - 25813607
13818

25799790 - 25813607
13818