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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25823568_25824687_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25823568 - 25824687

Intron Length:

1120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAA

U12 Branch Point Sequence:

TAACTGTCAACT

Flanking Amino Acid:

AIDNKIEQAMDLVKSHLMYA

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

63.3

0.33

1.2

39.8

Major PPT

89.2

0.88

0.7

84.7

30.1

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

47.1

-0.1

2.2

67.77

42.5

Associated Gene:

Gene:

TSC22D2

Ensembl Gene ID:

ENSAPLG00000028238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035249

25822781 - 25847109

24329

ENSAPLT00000023393

25822781 - 25847109

24329