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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25830966_25845055_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25830966 - 25845055

Intron Length:

14090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGGATCTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCAATATCT

Flanking Amino Acid:

ISIPVDGDEDRNPSTAFYQA

Intron Amino Acid Position:

662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

80.7

31.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

67.9

0.4

0.9

61.6

39.8

Minor 5ss

42.5

-0.8

3.5

64.3

47.2

Minor BPS

57.5

0.31

2.1

86.58

38.7

Associated Gene:

Gene:

TSC22D2

Ensembl Gene ID:

ENSAPLG00000028238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035249

25822781 - 25847109

24329

ENSAPLT00000033390

25822781 - 25847109

24329