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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25834698_25845055_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25834698 - 25845055

Intron Length:

10358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATCCTTATTG

Flanking Amino Acid:

ISIPVDGDEDRPLLQLGKIF

Intron Amino Acid Position:

662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

80.7

31.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.6

0.91

0.7

89.1

25.9

Minor 5ss

42.5

-0.8

3.5

64.3

47.2

Minor BPS

68.8

0.45

1.6

72.25

40.8

Associated Gene:

Gene:

TSC22D2

Ensembl Gene ID:

ENSAPLG00000028238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047410

25829431 - 25847109

17679

ENSAPLT00000038726

25833513 - 25847109

13597