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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25958750_25959527_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25958750 - 25959527

Intron Length:

778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

TGTTTTCTAACA

Flanking Amino Acid:

DKLRILPCSHAYHCKCVDPW

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.8

42.2

Major BPS

70.1

0.5

70.3

31.9

Major PPT

81.5

0.71

0.9

77.7

35.5

Minor 5ss

39.9

-1.1

2.9

41.5

Minor BPS

64.8

0.46

1.6

76.34

34.4

Associated Gene:

Gene:

RNF13

Ensembl Gene ID:

ENSAPLG00000009437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009908

25957277 - 25977473

20197