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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25959609_25963412_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25959609 - 25963412

Intron Length:

3804

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTATGTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATTCTCAATT

Flanking Amino Acid:

KKLPVHKFKKGDEYDVCAIC

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.1

1.16

0.7

91.7

21.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.8

0.49

66.4

40.5

Minor 5ss

25.9

-2.8

4.1

39.9

46.1

Minor BPS

66.4

0.59

1.5

79.33

36.7

Associated Gene:

Gene:

RNF13

Ensembl Gene ID:

ENSAPLG00000009437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009908

25957277 - 25977473

20197