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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25967438_25971867_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25967438 - 25971867

Intron Length:

4430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TGTTTTAGAAAC

Flanking Amino Acid:

SLKEEFTYEKGGHVVLIPEF

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.9

30.2

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

92.3

0.95

0.6

87.9

22.3

Minor 5ss

41.4

-1

2.9

49.9

46.4

Minor BPS

47.5

-0.2

1.8

62.07

36.6

Associated Gene:

Gene:

RNF13

Ensembl Gene ID:

ENSAPLG00000009437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009908

25957277 - 25977473

20197