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Intron Name: Anas_platyrhynchos_platyrhynchos_9_25983961_25984348_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25983961 - 25984348

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTCT

5'SS Class:

strong_major

3'SS Sequence:

ATGCTATATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

GTATCCCTACTC

Flanking Amino Acid:

HSLEWRLDVQLASRSLRQQI

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

33.4

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

69.6

0.44

63.3

41.7

Minor 5ss

48.4

-0.1

2.5

68.6

42.1

Minor BPS

50.7

1.9

64.87

40.6

Associated Gene:

Gene:

COMMD2

Ensembl Gene ID:

ENSAPLG00000029213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033279

25980439 - 25984546

4108