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Intron Name: Anas_platyrhynchos_platyrhynchos_9_26031495_26047751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26031495 - 26047751

Intron Length:

16257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTGTTCTTAATC

Flanking Amino Acid:

RSMAMSQPNLVMNHQHQITH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

80.9

33.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

84.6

0.78

0.7

80.2

25.4

Minor 5ss

33.4

-1.9

2.8

44.7

42.7

Minor BPS

80.2

0.93

81.54

33.1

Associated Gene:

Gene:

WWTR1

Ensembl Gene ID:

ENSAPLG00000009404

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035730

25994717 - 26055588

60872

ENSAPLT00000009789

26020521 - 26055588

35068

ENSAPLT00000048197

26030397 - 26055588

25192