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Intron Name: Anas_platyrhynchos_platyrhynchos_9_26067556_26070037_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26067556 - 26070037

Intron Length:

2482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

AATAACATAATT

Flanking Amino Acid:

GNESCGKRFAMFSSIIFAAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

72.7

38.8

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

84.3

0.77

0.9

85.1

29.7

Minor 5ss

32.5

-2

3.2

40.9

45.3

Minor BPS

0.11

1.8

71.04

39.1

Associated Gene:

Gene:

TM4SF4

Ensembl Gene ID:

ENSAPLG00000009122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045021

26066157 - 26070558

4402

ENSAPLT00000009519

26065894 - 26070558

4665