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Intron Name: Anas_platyrhynchos_platyrhynchos_9_26129302_26129781_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26129302 - 26129781

Intron Length:

480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

TTGCCAAAGAAT

Flanking Amino Acid:

LVGPLIICRKGTMNEGSDKH

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.4

36.7

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

93.1

0.97

0.6

91.8

Minor 5ss

31.6

-2.1

3.2

41.7

Minor BPS

39.7

-0.7

2.1

60.17

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032094

26125567 - 26144296

18730

ENSAPLT00000008158

26125567 - 26144274

18708