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Intron Name: Anas_platyrhynchos_platyrhynchos_9_26154314_26154892_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26154314 - 26154892

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAAACA

5'SS Class:

major

3'SS Sequence:

TTTATTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTATTTTAATA

Flanking Amino Acid:

NEDINEELSKESANKVLQIF

Intron Amino Acid Position:

630

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

67.7

37.5

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

80.1

0.68

0.9

77.7

35.3

Minor 5ss

31.7

-2.1

3.2

40.9

45.1

Minor BPS

73.5

0.73

1.1

79.23

30.7

Associated Gene:

Gene:

HPS3

Ensembl Gene ID:

ENSAPLG00000007197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007492

26146427 - 26164371

17945