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Intron Name: Anas_platyrhynchos_platyrhynchos_9_26155071_26155409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26155071 - 26155409

Intron Length:

339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTACTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TAATTGTTCATT

Flanking Amino Acid:

SCAFLGDCYSRFDTKDYHLA

Intron Amino Acid Position:

570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

0.7

0.9

77.8

35.6

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

46.8

-0.1

2.4

69.11

42.3

Associated Gene:

Gene:

HPS3

Ensembl Gene ID:

ENSAPLG00000007197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007492

26146427 - 26164371

17945