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Intron Name: Anas_platyrhynchos_platyrhynchos_9_26156807_26158030_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26156807 - 26158030

Intron Length:

1224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCACATC

5'SS Class:

major

3'SS Sequence:

CTTTTCTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

TTTTCTTTATAG

Flanking Amino Acid:

EDPYIDTTAKACPPVALDVC

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

65.7

40.2

Major BPS

64.7

0.37

31.5

Major PPT

88.2

0.86

0.6

24.2

Minor 5ss

36.8

-1.5

3.3

51.2

45.6

Minor BPS

0.3

1.8

72.46

40.4

Associated Gene:

Gene:

HPS3

Ensembl Gene ID:

ENSAPLG00000007197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007492

26146427 - 26164371

17945