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Intron Name: Anas_platyrhynchos_platyrhynchos_9_26158538_26159723_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26158538 - 26159723

Intron Length:

1186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGATGCT

5'SS Class:

major

3'SS Sequence:

TTGTTACATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTATTGTTACAT

Flanking Amino Acid:

SVQLLPIYQTGSSVTAHEET

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

72.1

37.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

71.5

0.49

64.1

42.1

Minor 5ss

33.3

-1.9

3.6

49.9

46.5

Minor BPS

47.9

-0

2.3

73.39

43.4

Associated Gene:

Gene:

HPS3

Ensembl Gene ID:

ENSAPLG00000007197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007492

26146427 - 26164371

17945