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Intron Name: Anas_platyrhynchos_platyrhynchos_9_26159810_26161168_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26159810 - 26161168

Intron Length:

1359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTACAA

5'SS Class:

major

3'SS Sequence:

ATATTTCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TCTCACTGATGT

Flanking Amino Acid:

KHFQVRYLLFRHFAPDQSPF

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

62.4

37.6

Major BPS

0.87

0.8

85.6

Major PPT

75.5

0.57

0.9

67.6

39.4

Minor 5ss

37.4

-1.4

47.8

47.7

Minor BPS

43.7

-0.4

2.1

63.34

46.2

Associated Gene:

Gene:

HPS3

Ensembl Gene ID:

ENSAPLG00000007197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007492

26146427 - 26164371

17945