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Intron Name: Anas_platyrhynchos_platyrhynchos_9_26163359_26164148_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26163359 - 26164148

Intron Length:

790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

TCTATATTGACG

Flanking Amino Acid:

SVLHMAHSRAGDYLVTIEEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

71.8

0.49

1.1

74.9

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

51.6

-0.1

1.7

59.96

41.9

Associated Gene:

Gene:

HPS3

Ensembl Gene ID:

ENSAPLG00000007197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007492

26146427 - 26164371

17945