Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_26179274_26183061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26179274 - 26183061

Intron Length:

3788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTATCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

AATCCTTTATCT

Flanking Amino Acid:

QFATEKGSFDGADQGLLNTF

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

78.6

0.71

78.6

Major PPT

87.5

0.84

0.7

84.9

29.5

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

63.2

0.49

1.6

77.26

38.9

Associated Gene:

Gene:

GYG1

Ensembl Gene ID:

ENSAPLG00000006837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007096

26174687 - 26188749

14063