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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2707436_2731738_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2707436 - 2731738

Intron Length:

24303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTCTAA

5'SS Class:

major

3'SS Sequence:

TCTTGTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CATGTCTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

65.7

36.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

87.1

0.84

0.7

84.6

30.3

Minor 5ss

49.3

-0

2.5

64.4

Minor BPS

60.7

0.2

1.5

59.43

43.1

Associated Gene:

Gene:

TRIP12

Ensembl Gene ID:

ENSAPLG00000007997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008429

2707206 - 2779740

72535