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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2754478_2754876_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2754478 - 2754876

Intron Length:

399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACATGA

5'SS Class:

major

3'SS Sequence:

TGTTTTATTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TGATCTACAAAT

Flanking Amino Acid:

VDAIPVFLEKLQVIQCIDVA

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

68.7

39.1

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

81.7

0.71

0.8

74.7

Minor 5ss

42.8

-0.8

2.9

56.9

47.1

Minor BPS

48.1

-0

1.9

68.72

41.3

Associated Gene:

Gene:

TRIP12

Ensembl Gene ID:

ENSAPLG00000007997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030147

2731739 - 2780094

48356

ENSAPLT00000019971

2731739 - 2780094

48356

ENSAPLT00000018445

2731739 - 2780094

48356

ENSAPLT00000045018

2731739 - 2780094

48356

ENSAPLT00000008429

2707206 - 2779740

72535

ENSAPLT00000041082

2731739 - 2780094

48356