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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2755278_2756027_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2755278 - 2756027

Intron Length:

750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATA

Flanking Amino Acid:

PLLTQRLTHQDKKSVESTCL

Intron Amino Acid Position:

636

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

0.74

0.8

81.2

29.3

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

74.7

0.77

1.1

29.3

Associated Gene:

Gene:

TRIP12

Ensembl Gene ID:

ENSAPLG00000007997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008429

2707206 - 2779740

72535

ENSAPLT00000041082

2731739 - 2780094

48356

ENSAPLT00000030147

2731739 - 2780094

48356

ENSAPLT00000019971

2731739 - 2780094

48356

ENSAPLT00000018445

2731739 - 2780094

48356

ENSAPLT00000045018

2731739 - 2780094

48356