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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2756097_2756223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2756097 - 2756223

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCTGAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATCACATTAACA

Flanking Amino Acid:

RLVDNFQHEENLLQQVASKD

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.3

0.7

0.9

83.5

25.2

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

0.44

1.7

72.08

39.4

Associated Gene:

Gene:

TRIP12

Ensembl Gene ID:

ENSAPLG00000007997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008429

2707206 - 2779740

72535

ENSAPLT00000041082

2731739 - 2780094

48356

ENSAPLT00000030147

2731739 - 2780094

48356

ENSAPLT00000019971

2731739 - 2780094

48356

ENSAPLT00000018445

2731739 - 2780094

48356

ENSAPLT00000045018

2731739 - 2780094

48356