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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2759479_2760054_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2759479 - 2760054

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAGAC

U12 Branch Point Sequence:

TCTTTTTTGAAG

Flanking Amino Acid:

DIFSVYFRREGVMHQVKNLA

Intron Amino Acid Position:

973

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

74.6

41.7

Major BPS

49.9

-0

1.1

36.1

Major PPT

83.4

0.75

0.9

86.2

25.3

Minor 5ss

43.9

-0.7

3.2

65.5

45.6

Minor BPS

58.2

0.11

1.5

62.4

40.1

Associated Gene:

Gene:

TRIP12

Ensembl Gene ID:

ENSAPLG00000007997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019971

2731739 - 2780094

48356

ENSAPLT00000018445

2731739 - 2780094

48356

ENSAPLT00000045018

2731739 - 2780094

48356

ENSAPLT00000008429

2707206 - 2779740

72535

ENSAPLT00000041082

2731739 - 2780094

48356

ENSAPLT00000030147

2731739 - 2780094

48356