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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2761524_2762077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2761524 - 2762077

Intron Length:

554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

TGCTTCTTTACA

Flanking Amino Acid:

AASKDTISNNREKIKGWIKE

Intron Amino Acid Position:

1134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

70.6

41.3

Major BPS

64.1

0.35

1.2

45.5

Major PPT

85.4

0.8

79.6

32.5

Minor 5ss

44.8

-0.6

2.6

56.4

Minor BPS

64.3

0.44

1.6

71.54

40.3

Associated Gene:

Gene:

TRIP12

Ensembl Gene ID:

ENSAPLG00000007997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018445

2731739 - 2780094

48356

ENSAPLT00000045018

2731739 - 2780094

48356

ENSAPLT00000008429

2707206 - 2779740

72535

ENSAPLT00000041082

2731739 - 2780094

48356

ENSAPLT00000030147

2731739 - 2780094

48356

ENSAPLT00000019971

2731739 - 2780094

48356