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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2770624_2771164_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2770624 - 2771164

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAC

U12 Branch Point Sequence:

CTTCCCTGCACC

Flanking Amino Acid:

AMLEIQYENEVGTGLGPTLE

Intron Amino Acid Position:

1667

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

89.8

22.2

Major BPS

46.1

-0.2

1.4

54.6

40.8

Major PPT

70.9

0.47

71.5

26.9

Minor 5ss

39.1

-1.2

2.8

51.7

39.1

Minor BPS

53.9

0.11

68.78

42.5

Associated Gene:

Gene:

TRIP12

Ensembl Gene ID:

ENSAPLG00000007997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018445

2731739 - 2780094

48356

ENSAPLT00000008429

2707206 - 2779740

72535

ENSAPLT00000045018

2731739 - 2780094

48356

ENSAPLT00000030147

2731739 - 2780094

48356

ENSAPLT00000019971

2731739 - 2780094

48356