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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2771626_2772170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2771626 - 2772170

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCAATTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATTTTTTCAATT

Flanking Amino Acid:

MAKAIMDFRLVDLPLGLPFY

Intron Amino Acid Position:

1757

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

76.8

34.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

0.59

0.8

74.2

35.2

Minor 5ss

47.6

-0.2

2.8

61.3

44.6

Minor BPS

66.9

0.61

1.4

81.89

33.7

Associated Gene:

Gene:

TRIP12

Ensembl Gene ID:

ENSAPLG00000007997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030147

2731739 - 2780094

48356

ENSAPLT00000019971

2731739 - 2780094

48356

ENSAPLT00000045018

2731739 - 2780094

48356

ENSAPLT00000018445

2731739 - 2780094

48356

ENSAPLT00000041082

2731739 - 2780094

48356

ENSAPLT00000008429

2707206 - 2779740

72535