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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2776743_2778249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2776743 - 2778249

Intron Length:

1507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGTATG

5'SS Class:

major

3'SS Sequence:

TTTAATTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

SHLQYFYPEELEQLLCGSKT

Intron Amino Acid Position:

1905

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.2

73.9

42.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.1

0.72

0.8

76.8

Minor 5ss

34.3

-1.8

2.9

42.3

44.5

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

TRIP12

Ensembl Gene ID:

ENSAPLG00000007997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018445

2731739 - 2780094

48356

ENSAPLT00000045018

2731739 - 2780094

48356

ENSAPLT00000008429

2707206 - 2779740

72535

ENSAPLT00000041082

2731739 - 2780094

48356

ENSAPLT00000030147

2731739 - 2780094

48356

ENSAPLT00000019971

2731739 - 2780094

48356